Extend cobra.Reaction to point to proteins.
Module Contents
Classes
Reaction
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geckopy.Reaction has an additional attribute .proteins. |
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class geckopy.reaction.Reaction[source]
Bases: cobra.Reaction
geckopy.Reaction has an additional attribute .proteins.
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property proteins(self)[source]
Retrieve metabolites participating in the reaction that are proteins.
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add_protein(self, id: str, kcat: float, concentration: Optional[float] = None, name: Optional[str] = None)[source]
Add a protein to the reaction.
- Parameters
id (str) –
kcat (float (1/s)) –
concentration (float) –
name (str) –
